PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 38594
Common NameSELMODRAFT_38592, SELMODRAFT_38594
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
Family bZIP
Protein Properties Length: 70aa    MW: 8541.4 Da    PI: 9.9746
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
38594genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_159.76.1e-19967159
            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  bZIP_1  1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59
            e+elkr+rrkq+NRe+ArrsRqRK++e+eeL  kv+ L++ N++Lk +l   ++   +l
   38594  9 ERELKRQRRKQSNRESARRSRQRKQKECEELSHKVEDLTQDNERLKAQLADVQEIKRQL 67
            89********************************************9998877766665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.5E-18268No hitNo description
PfamPF001706.3E-17968IPR004827Basic-leucine zipper domain
SMARTSM003381.0E-13969IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.5761170IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.5E-121267No hitNo description
CDDcd147029.83E-101462No hitNo description
PROSITE patternPS0003601631IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    Send to blast
SSSFKSQDER ELKRQRRKQS NRESARRSRQ RKQKECEELS HKVEDLTQDN ERLKAQLADV  60
QEIKRQLEEE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12531RRSRQRK
22532RRSRQRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002969834.17e-40hypothetical protein SELMODRAFT_38594, partial
RefseqXP_002985171.17e-40hypothetical protein SELMODRAFT_38592, partial
SwissprotQ501B22e-17BZP16_ARATH; bZIP transcription factor 16
TrEMBLD8RG107e-40D8RG10_SELML; Putative uncharacterized protein (Fragment)
STRINGEFJ136652e-39(Selaginella moellendorffii)
STRINGEFJ289582e-39(Selaginella moellendorffii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP7001767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-18basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Banks JA, et al.
    The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
    Science, 2011. 332(6032): p. 960-3
    [PMID:21551031]